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Bio: Sparse Multiway Data Integration

Motivation for this group. Instances of data of different types available on the same patients/subjects include: - RNA-seq, ChIP-seq, Methylation Arrays, OTU abundances, Clinical variables, 0/1 data. - Longitudinal data of any of the above type. - Series of networks measured on the same `nodes' either over time or through different techniques. - Bayesian posterior distributions or Bootstrap sampling of matrix data with the same rows and columns. We would like to compare the different approaches already available for these types of data on a few common data sets. We will start with some working examples from the human microbiome. A first file will be available through google docs for people to fill in with information pertaining to the methods they suggest using on some of these multiway data. There is definitely overlap with several other groups, with which we will try and coordinate. There will be a second file Data file pointing to resources for those who want to analyze actual examples.

jyotishka's picture

Weekly Meeting (Tuesday, 11/25, 11 AM EST)

Weekly Meeting
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Date and Time:
Tuesday, November 25, 2014 11:00 am, Eastern Standard Time (New York, GMT-05:00)
Join Webex Meeting: http://bit.ly/1xbqNGX
Event number: 661 640 365
Event password: Mdata1
N.B.
1. If the link above appears broken, please visit samsi100.webex.com to see the list of events by program and click 'join' next to the event named 'Sparse Multiway Data Integration'. Alternatively, visit the SAMSI webpage for our working group to find the full link.

Meeting Date: 
November 25, 2014 - 11:00am - 1:00pm
jyotishka's picture

Weekly Meeting (Tuesday, 11/18, 11 AM EST)

Sparse Multiway Data Integration
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To join the online event
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1. Copy and paste the following link to a browser:
https://samsi100.webex.com/samsi100/onstage/g.php?MTID=e0e009be94c7f8937...
2. Click "Join Now".

N.B. If the link above appears broken, please visit samsi100.webex.com to see the list of events by program and click 'join' next to the event named 'Sparse Multiway Data Integration'.
Alternatively, visit the SAMSI webpage for our working group to find the full link.

Meeting Date: 
November 18, 2014 - 11:00am - 1:00pm
jyotishka's picture

Weekly Meeting (Tuesday, 11/11, 11 AM EST)

Sparse Multiway Data Integration
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Date and time: Tuesday, November 11, 2014 11:00 am
Eastern Standard Time (New York, GMT-05:00)
Duration: 2 hours

Event number: 668 066 823
Event password: Mdata1

Event address for attendees:
https://samsi100.webex.com/samsi100/onstage/g.php?MTID=e5c16946397172522...

Event address for panelists:
https://samsi100.webex.com/samsi100/onstage/g.php?MTID=e66375b9a56d111ba...

Meeting Date: 
November 11, 2014 - 11:00am - 1:00pm
jyotishka's picture

Weekly Meeting (Tuesday, 10/28, 11 AM EST)

Sparse Multiway Data Integration
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Date and Time:
Tuesday, October 28, 2014 11:00 am, Eastern Daylight Time (New York, GMT-04:00)

Event number: 668 240 602
Event password: Mdata1

-------------------------------------------------------
To join the online event
-------------------------------------------------------
1. Copy and paste the following link to a browser:
https://samsi100.webex.com/samsi100/onstage/g.php?t=a&d=668240602
2. Click "Join Now".

Location: SAMSI Room 203.

Meeting Date: 
October 28, 2014 - 11:00am - 1:00pm
jyotishka's picture

Slides from yesterday's talk (Cumulative Distribution Network)

jyotishka's picture

Weekly Meeting, Tuesday, 10/21, 9 AM EST.

Sparse Multiway Data Integration
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Date and Time:
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Tuesday, October 21, 2014 9:00 am, Eastern Daylight Time (New York, GMT-04:00)
(**Please note the time change for this week's meeting**)

----------------------------
To join the online event
-----------------------------
1. Copy and paste the following link to a browser:
https://samsi100.webex.com/samsi100/onstage/g.php?MTID=ecb46b20aefe22f80...
2. Click "Join Now".

Event number: 662 313 728
Event password: Ddata1

N.B.

Meeting Date: 
October 21, 2014 - 9:00am - 11:00am
Susan Holmes's picture

Aedin's Documents

jyotishka's picture

Weekly Meeting (Tuesday, 10/07/14, 11 AM EST)

Sparse Multiway Data Integration
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Tuesday, October 7, 2014
11:00 am | Eastern Daylight Time (New York, GMT-04:00) | 2 hr

Join WebEx meeting
https://samsi.webex.com/samsi/j.php?MTID=mb1d5d5c05c0fe1c12b71bdf2dfd2147b
Meeting number: 685 989 121
Meeting password: Mdata1

Please note that we have set up this meeting as VoIP. To use VoIP, participants must have a working microphone and speaker on their computers.

Meeting Date: 
October 7, 2014 - 11:00am - 1:00pm
Ali Shojaie's picture

Kernel-based learning slides -- Ali Shojaie, 09/30/2014

jyotishka's picture

Working Group Meeting (09/30, Tuesday, 11 AM EST)

Sparse Multiway Data Integration
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Tuesday, September 30, 2014
11:00 am | Eastern Daylight Time (New York, GMT-04:00) | 2 hr

Join Webex Meeting

https://samsi.webex.com/samsi/j.php?MTID=md7f6e67ec56eeadff258bc80126a3cf7

Meeting number: 686 466 151
Meeting password: Mdata1

Please note that we have set up this meeting as VoIP instead of teleconferencing. To use VoIP, participants must have a working microphone and speaker on their computers.

Meeting Date: 
September 30, 2014 - 11:00am - 1:00pm